Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Gm15165-201ENSMUST00000118140 502 ntBASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sfr1Q8BP27 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sfr1Q8BP27 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Sfr1Q8BP27 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Mir6404-201ENSMUST00000183699 94 ntBASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sfr1Q8BP27 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sfr1Q8BP27 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Sfr1Q8BP27 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms