Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 AC124732.2-201ENSMUST00000221977 316 ntBASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col16a1Q8BLX7 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Gm25287-201ENSMUST00000103846 110 ntBASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Gm22918-201ENSMUST00000103855 110 ntBASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Gm8318-201ENSMUST00000182954 872 ntBASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Gm10253-201ENSMUST00000194270 940 ntBASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Gm7774-201ENSMUST00000200064 533 ntBASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col16a1Q8BLX7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col16a1Q8BLX7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Gm5745-201ENSMUST00000183748 313 ntBASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Col16a1Q8BLX7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Arhgef33-209ENSMUST00000225223 714 ntBASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Col16a1Q8BLX7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col16a1Q8BLX7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms