Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Mir5130-201ENSMUST00000175160 84 ntBASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Gm7889-201ENSMUST00000185591 958 ntBASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2bQ8BJF9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2bQ8BJF9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2bQ8BJF9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms