Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf38Q8BI21 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf38Q8BI21 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf38Q8BI21 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 BC037039-201ENSMUST00000192003 2205 ntBASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms