Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
U2af1l4Q8BGJ9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Gm44430-201ENSMUST00000203376 995 ntBASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1l4Q8BGJ9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
U2af1l4Q8BGJ9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Gm11779-201ENSMUST00000118541 368 ntBASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Gm43575-201ENSMUST00000196420 516 ntBASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1l4Q8BGJ9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Gm10060-201ENSMUST00000212002 111 ntBASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
U2af1l4Q8BGJ9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1l4Q8BGJ9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms