Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.66■□□□□ 0.1
Ubp1Q811S7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.66■□□□□ 0.1
Ubp1Q811S7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.66■□□□□ 0.1
Ubp1Q811S7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ubp1Q811S7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.65■□□□□ 0.1
Ubp1Q811S7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Gm15165-201ENSMUST00000118140 502 ntBASIC15.65■□□□□ 0.1
Ubp1Q811S7 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.65■□□□□ 0.1
Ubp1Q811S7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ubp1Q811S7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Ubp1Q811S7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.64■□□□□ 0.09
Ubp1Q811S7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.64■□□□□ 0.09
Ubp1Q811S7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ubp1Q811S7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.63■□□□□ 0.09
Ubp1Q811S7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ubp1Q811S7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ubp1Q811S7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ubp1Q811S7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ubp1Q811S7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ubp1Q811S7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ubp1Q811S7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ubp1Q811S7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Ubp1Q811S7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ubp1Q811S7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms