Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atpaf1Q811I0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Atpaf1Q811I0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atpaf1Q811I0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atpaf1Q811I0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atpaf1Q811I0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atpaf1Q811I0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atpaf1Q811I0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atpaf1Q811I0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atpaf1Q811I0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Atpaf1Q811I0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.02□□□□□ -0.33
Atpaf1Q811I0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atpaf1Q811I0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Gm10849-201ENSMUST00000100397 618 ntBASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Gm12134-201ENSMUST00000122109 520 ntBASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Gm26524-201ENSMUST00000192339 390 ntBASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atpaf1Q811I0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Atpaf1Q811I0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Atpaf1Q811I0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 Gm45605-201ENSMUST00000210265 4269 ntBASIC13□□□□□ -0.33
Atpaf1Q811I0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13□□□□□ -0.33
Atpaf1Q811I0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 Gm5357-201ENSMUST00000212720 1924 ntBASIC13□□□□□ -0.33
Atpaf1Q811I0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Atpaf1Q811I0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13□□□□□ -0.33
Atpaf1Q811I0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atpaf1Q811I0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms