Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank2Q80Z38 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank2Q80Z38 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank2Q80Z38 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Gm12017-201ENSMUST00000122453 1003 ntBASIC20.36■□□□□ 0.85
Shank2Q80Z38 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Shank2Q80Z38 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shank2Q80Z38 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank2Q80Z38 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank2Q80Z38 Gm7488-201ENSMUST00000117148 684 ntBASIC20.35■□□□□ 0.85
Shank2Q80Z38 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Shank2Q80Z38 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shank2Q80Z38 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC20.35■□□□□ 0.85
Shank2Q80Z38 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC20.35■□□□□ 0.85
Shank2Q80Z38 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank2Q80Z38 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shank2Q80Z38 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Shank2Q80Z38 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank2Q80Z38 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shank2Q80Z38 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.35■□□□□ 0.85
Shank2Q80Z38 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shank2Q80Z38 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.33■□□□□ 0.85
Shank2Q80Z38 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank2Q80Z38 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank2Q80Z38 Gm6415-201ENSMUST00000118488 348 ntBASIC20.33■□□□□ 0.85
Shank2Q80Z38 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC20.33■□□□□ 0.85
Shank2Q80Z38 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC20.33■□□□□ 0.85
Shank2Q80Z38 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Shank2Q80Z38 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank2Q80Z38 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank2Q80Z38 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shank2Q80Z38 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shank2Q80Z38 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.33■□□□□ 0.84
Shank2Q80Z38 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shank2Q80Z38 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shank2Q80Z38 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank2Q80Z38 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank2Q80Z38 Gm13453-201ENSMUST00000118708 357 ntBASIC20.32■□□□□ 0.84
Shank2Q80Z38 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC20.32■□□□□ 0.84
Shank2Q80Z38 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Shank2Q80Z38 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank2Q80Z38 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Shank2Q80Z38 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank2Q80Z38 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shank2Q80Z38 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shank2Q80Z38 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shank2Q80Z38 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Shank2Q80Z38 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shank2Q80Z38 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC20.31■□□□□ 0.84
Shank2Q80Z38 Gm7730-201ENSMUST00000212486 454 ntBASIC20.31■□□□□ 0.84
Shank2Q80Z38 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC20.31■□□□□ 0.84
Shank2Q80Z38 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.31■□□□□ 0.84
Shank2Q80Z38 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.31■□□□□ 0.84
Shank2Q80Z38 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank2Q80Z38 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank2Q80Z38 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shank2Q80Z38 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shank2Q80Z38 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.31■□□□□ 0.84
Shank2Q80Z38 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shank2Q80Z38 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Shank2Q80Z38 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC20.3■□□□□ 0.84
Shank2Q80Z38 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Shank2Q80Z38 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Shank2Q80Z38 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Shank2Q80Z38 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms