Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp6nlQ80XC3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp6nlQ80XC3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Gm17968-201ENSMUST00000194902 784 ntBASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp6nlQ80XC3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Usp6nlQ80XC3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp6nlQ80XC3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.46■□□□□ 0.39
Usp6nlQ80XC3 Gm15920-201ENSMUST00000118998 402 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms