Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnrc18Q80WC3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnrc18Q80WC3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnrc18Q80WC3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tnrc18Q80WC3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Tnrc18Q80WC3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tnrc18Q80WC3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.69■□□□□ 0.1
Tnrc18Q80WC3 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.69■□□□□ 0.1
Tnrc18Q80WC3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnrc18Q80WC3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Gm18187-201ENSMUST00000196476 984 ntBASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Gm2272-201ENSMUST00000194903 582 ntBASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tnrc18Q80WC3 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Gm18737-201ENSMUST00000173594 937 ntBASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tnrc18Q80WC3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Gm12151-201ENSMUST00000121374 290 ntBASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Gm25144-201ENSMUST00000179561 110 ntBASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Gm25352-201ENSMUST00000179815 110 ntBASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Gm13015-201ENSMUST00000118674 204 ntBASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Gm6257-201ENSMUST00000163864 910 ntBASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tnrc18Q80WC3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.65■□□□□ 0.1
Tnrc18Q80WC3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms