Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh19Q80TF3 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Gm6089-201ENSMUST00000197666 938 ntBASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh19Q80TF3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Gm7222-201ENSMUST00000117512 906 ntBASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Mir5126-201ENSMUST00000175513 77 ntBASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms