Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm29361-201ENSMUST00000183323 2000 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm22065-201ENSMUST00000103753 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm22066-201ENSMUST00000103761 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm24932-201ENSMUST00000103763 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm24115-201ENSMUST00000103799 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm22190-201ENSMUST00000103827 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm22191-201ENSMUST00000103831 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm24721-201ENSMUST00000103849 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm28018-201ENSMUST00000103869 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm26399-201ENSMUST00000103937 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm16198-201ENSMUST00000118766 670 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm25349-201ENSMUST00000177728 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm23616-201ENSMUST00000177797 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm25871-201ENSMUST00000177816 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm24752-201ENSMUST00000178240 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm24496-201ENSMUST00000178287 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm25649-201ENSMUST00000178476 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm25548-201ENSMUST00000178681 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm23147-201ENSMUST00000178841 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm26095-201ENSMUST00000179270 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm22171-201ENSMUST00000179283 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm23936-201ENSMUST00000179354 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm22619-201ENSMUST00000179516 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm25255-201ENSMUST00000179579 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm24755-201ENSMUST00000179691 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm26506-201ENSMUST00000179692 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm25086-201ENSMUST00000179931 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm23243-201ENSMUST00000180047 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm24659-201ENSMUST00000180212 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm24169-201ENSMUST00000180244 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm23689-201ENSMUST00000180354 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm27359-201ENSMUST00000184153 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm27785-201ENSMUST00000184268 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm27466-201ENSMUST00000184396 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm27703-201ENSMUST00000184836 110 ntBASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rpap1Q80TE0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Rpap1Q80TE0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC24.46■■□□□ 1.51
Rpap1Q80TE0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC24.46■■□□□ 1.51
Rpap1Q80TE0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC24.46■■□□□ 1.51
Rpap1Q80TE0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC24.46■■□□□ 1.51
Rpap1Q80TE0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Rpap1Q80TE0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Rpap1Q80TE0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Rpap1Q80TE0 Gm12008-201ENSMUST00000117791 755 ntBASIC24.45■■□□□ 1.51
Rpap1Q80TE0 Gm12428-201ENSMUST00000119844 727 ntBASIC24.45■■□□□ 1.51
Rpap1Q80TE0 Gm7286-201ENSMUST00000182691 1007 ntBASIC24.45■■□□□ 1.51
Rpap1Q80TE0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Rpap1Q80TE0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
Rpap1Q80TE0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rpap1Q80TE0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Rpap1Q80TE0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
Rpap1Q80TE0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rpap1Q80TE0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rpap1Q80TE0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rpap1Q80TE0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rpap1Q80TE0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rpap1Q80TE0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Gm7774-201ENSMUST00000200064 533 ntBASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 CT025535.1-201ENSMUST00000227172 491 ntBASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rpap1Q80TE0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms