Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vma21Q78T54 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vma21Q78T54 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vma21Q78T54 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vma21Q78T54 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vma21Q78T54 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Vma21Q78T54 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.97□□□□□ -0.33
Vma21Q78T54 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vma21Q78T54 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Gm26039-201ENSMUST00000158152 144 ntBASIC12.97□□□□□ -0.33
Vma21Q78T54 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.97□□□□□ -0.33
Vma21Q78T54 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.97□□□□□ -0.33
Vma21Q78T54 Mir1668-201ENSMUST00000184114 107 ntBASIC12.97□□□□□ -0.33
Vma21Q78T54 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Gm37055-201ENSMUST00000191866 133 ntBASIC12.97□□□□□ -0.33
Vma21Q78T54 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.97□□□□□ -0.33
Vma21Q78T54 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vma21Q78T54 Gm10566-201ENSMUST00000086739 996 ntBASIC12.97□□□□□ -0.33
Vma21Q78T54 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vma21Q78T54 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.97□□□□□ -0.33
Vma21Q78T54 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vma21Q78T54 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.97□□□□□ -0.33
Vma21Q78T54 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.97□□□□□ -0.33
Vma21Q78T54 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vma21Q78T54 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vma21Q78T54 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.96□□□□□ -0.33
Vma21Q78T54 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Vma21Q78T54 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vma21Q78T54 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Vma21Q78T54 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.96□□□□□ -0.33
Vma21Q78T54 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.96□□□□□ -0.33
Vma21Q78T54 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Gm13436-201ENSMUST00000120418 567 ntBASIC12.96□□□□□ -0.33
Vma21Q78T54 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.96□□□□□ -0.33
Vma21Q78T54 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.96□□□□□ -0.33
Vma21Q78T54 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.96□□□□□ -0.33
Vma21Q78T54 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.96□□□□□ -0.33
Vma21Q78T54 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
Vma21Q78T54 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Vma21Q78T54 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vma21Q78T54 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vma21Q78T54 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vma21Q78T54 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vma21Q78T54 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vma21Q78T54 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vma21Q78T54 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vma21Q78T54 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vma21Q78T54 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Vma21Q78T54 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Mir5130-201ENSMUST00000175160 84 ntBASIC12.95□□□□□ -0.34
Vma21Q78T54 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.95□□□□□ -0.34
Vma21Q78T54 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms