Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Gm5186-201ENSMUST00000218781 920 ntBASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Grk6-207ENSMUST00000225925 2769 ntBASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx55Q6ZPL9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx55Q6ZPL9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx55Q6ZPL9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx55Q6ZPL9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Gm25948-201ENSMUST00000175334 112 ntBASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Gm18246-201ENSMUST00000221023 728 ntBASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ddx55Q6ZPL9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Gm18889-201ENSMUST00000174284 929 ntBASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx55Q6ZPL9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Rprl2-201ENSMUST00000157150 290 ntBASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx55Q6ZPL9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 Rpph1-201ENSMUST00000175096 319 ntBASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 Mir7023-201ENSMUST00000185093 64 ntBASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx55Q6ZPL9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms