Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Gm27321-201ENSMUST00000185021 205 ntBASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Gm44335-201ENSMUST00000196879 141 ntBASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Gm44297-201ENSMUST00000198304 141 ntBASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Gm44346-201ENSMUST00000198851 141 ntBASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Gm19164-201ENSMUST00000210667 640 ntBASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Gm45747-201ENSMUST00000212203 999 ntBASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Snrnp40Q6PE01 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Gm15427-201ENSMUST00000117288 531 ntBASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Gm13365-201ENSMUST00000121188 973 ntBASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Gm27301-201ENSMUST00000184012 127 ntBASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Snrnp40Q6PE01 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Gm45612-201ENSMUST00000211320 160 ntBASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Snrnp40Q6PE01 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms