Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Gm27357-201ENSMUST00000183754 135 ntBASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hdac4Q6NZM9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.77■□□□□ 0.44
Hdac4Q6NZM9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac4Q6NZM9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac4Q6NZM9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac4Q6NZM9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac4Q6NZM9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.77■□□□□ 0.43
Hdac4Q6NZM9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hdac4Q6NZM9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hdac4Q6NZM9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hdac4Q6NZM9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms