Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Mir6982-201ENSMUST00000184354 68 ntBASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga7Q6DD96 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Gm11355-201ENSMUST00000121120 306 ntBASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga7Q6DD96 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Gm18101-201ENSMUST00000215769 548 ntBASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Gm18032-201ENSMUST00000222541 538 ntBASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Pcdhga7Q6DD96 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga7Q6DD96 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga7Q6DD96 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms