Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Gm27628-201ENSMUST00000184911 107 ntBASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdzrn3Q69ZS0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Gm7222-201ENSMUST00000117512 906 ntBASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.44■□□□□ 0.7
Pdzrn3Q69ZS0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdzrn3Q69ZS0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Gm23935-201ENSMUST00000102303 57 ntBASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Gm24270-201ENSMUST00000102326 57 ntBASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Gm24245-201ENSMUST00000157318 57 ntBASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Gm24513-201ENSMUST00000174964 138 ntBASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdzrn3Q69ZS0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Gm27397-201ENSMUST00000184997 107 ntBASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms