Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.59■□□□□ 0.57
Scn9aQ62205 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn9aQ62205 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn9aQ62205 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn9aQ62205 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn9aQ62205 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Scn9aQ62205 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scn9aQ62205 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn9aQ62205 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn9aQ62205 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn9aQ62205 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn9aQ62205 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.58■□□□□ 0.56
Scn9aQ62205 Gm15693-201ENSMUST00000120470 637 ntBASIC18.58■□□□□ 0.56
Scn9aQ62205 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn9aQ62205 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn9aQ62205 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.58■□□□□ 0.56
Scn9aQ62205 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Scn9aQ62205 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn9aQ62205 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn9aQ62205 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Scn9aQ62205 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn9aQ62205 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn9aQ62205 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn9aQ62205 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Scn9aQ62205 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.57■□□□□ 0.56
Scn9aQ62205 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Gm2423-201ENSMUST00000074863 733 ntBASIC18.57■□□□□ 0.56
Scn9aQ62205 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Scn9aQ62205 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.57■□□□□ 0.56
Scn9aQ62205 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn9aQ62205 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn9aQ62205 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.57■□□□□ 0.56
Scn9aQ62205 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Scn9aQ62205 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn9aQ62205 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn9aQ62205 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn9aQ62205 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn9aQ62205 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn9aQ62205 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn9aQ62205 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn9aQ62205 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn9aQ62205 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn9aQ62205 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn9aQ62205 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.56■□□□□ 0.56
Scn9aQ62205 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn9aQ62205 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 Gm38294-201ENSMUST00000192831 381 ntBASIC18.55■□□□□ 0.56
Scn9aQ62205 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Scn9aQ62205 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.55■□□□□ 0.56
Scn9aQ62205 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn9aQ62205 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn9aQ62205 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Scn9aQ62205 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn9aQ62205 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn9aQ62205 Gm27430-201ENSMUST00000184585 107 ntBASIC18.54■□□□□ 0.56
Scn9aQ62205 Gm44333-201ENSMUST00000197168 107 ntBASIC18.54■□□□□ 0.56
Scn9aQ62205 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn9aQ62205 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Scn9aQ62205 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.54■□□□□ 0.56
Scn9aQ62205 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.54■□□□□ 0.56
Scn9aQ62205 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn9aQ62205 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn9aQ62205 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.53■□□□□ 0.56
Scn9aQ62205 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn9aQ62205 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 Gm18057-201ENSMUST00000208220 503 ntBASIC18.53■□□□□ 0.56
Scn9aQ62205 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms