Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.83□□□□□ -0.04
VcanQ62059 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcanQ62059 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.83□□□□□ -0.04
VcanQ62059 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
VcanQ62059 Gm24158-201ENSMUST00000175263 71 ntBASIC14.83□□□□□ -0.04
VcanQ62059 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VcanQ62059 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcanQ62059 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcanQ62059 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VcanQ62059 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VcanQ62059 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcanQ62059 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcanQ62059 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.82□□□□□ -0.04
VcanQ62059 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcanQ62059 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.82□□□□□ -0.04
VcanQ62059 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcanQ62059 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
VcanQ62059 Gm17150-201ENSMUST00000165577 381 ntBASIC14.82□□□□□ -0.04
VcanQ62059 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.82□□□□□ -0.04
VcanQ62059 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcanQ62059 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcanQ62059 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcanQ62059 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.82□□□□□ -0.04
VcanQ62059 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.82□□□□□ -0.04
VcanQ62059 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VcanQ62059 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.82□□□□□ -0.04
VcanQ62059 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcanQ62059 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VcanQ62059 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcanQ62059 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.81□□□□□ -0.04
VcanQ62059 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VcanQ62059 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.81□□□□□ -0.04
VcanQ62059 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.81□□□□□ -0.04
VcanQ62059 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.81□□□□□ -0.04
VcanQ62059 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.81□□□□□ -0.04
VcanQ62059 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VcanQ62059 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VcanQ62059 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.81□□□□□ -0.04
VcanQ62059 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.81□□□□□ -0.04
VcanQ62059 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
VcanQ62059 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
VcanQ62059 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VcanQ62059 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.81□□□□□ -0.04
VcanQ62059 Gm15693-201ENSMUST00000120470 637 ntBASIC14.81□□□□□ -0.04
VcanQ62059 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
VcanQ62059 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.81□□□□□ -0.04
VcanQ62059 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.81□□□□□ -0.04
VcanQ62059 Gm28631-201ENSMUST00000190740 334 ntBASIC14.81□□□□□ -0.04
VcanQ62059 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.81□□□□□ -0.04
VcanQ62059 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VcanQ62059 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VcanQ62059 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VcanQ62059 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.8□□□□□ -0.04
VcanQ62059 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VcanQ62059 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VcanQ62059 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VcanQ62059 Gm7488-201ENSMUST00000117148 684 ntBASIC14.8□□□□□ -0.04
VcanQ62059 Gm15321-201ENSMUST00000121290 288 ntBASIC14.8□□□□□ -0.04
VcanQ62059 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
VcanQ62059 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
VcanQ62059 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VcanQ62059 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VcanQ62059 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.8□□□□□ -0.04
VcanQ62059 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VcanQ62059 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VcanQ62059 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VcanQ62059 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.8□□□□□ -0.04
VcanQ62059 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VcanQ62059 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Gm45384-201ENSMUST00000210451 277 ntBASIC14.79□□□□□ -0.04
VcanQ62059 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.79□□□□□ -0.04
VcanQ62059 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.79□□□□□ -0.04
VcanQ62059 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Gm16215-201ENSMUST00000161990 637 ntBASIC14.79□□□□□ -0.04
VcanQ62059 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Gm18622-201ENSMUST00000219361 595 ntBASIC14.79□□□□□ -0.04
VcanQ62059 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VcanQ62059 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms