Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.26■□□□□ 0.03
ClpbQ60649 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ClpbQ60649 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ClpbQ60649 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.25■□□□□ 0.03
ClpbQ60649 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.25■□□□□ 0.03
ClpbQ60649 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.25■□□□□ 0.03
ClpbQ60649 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.25■□□□□ 0.03
ClpbQ60649 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.25■□□□□ 0.03
ClpbQ60649 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ClpbQ60649 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.25■□□□□ 0.03
ClpbQ60649 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.25■□□□□ 0.03
ClpbQ60649 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
ClpbQ60649 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ClpbQ60649 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ClpbQ60649 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
ClpbQ60649 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.24■□□□□ 0.03
ClpbQ60649 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.24■□□□□ 0.03
ClpbQ60649 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.24■□□□□ 0.03
ClpbQ60649 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ClpbQ60649 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ClpbQ60649 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ClpbQ60649 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ClpbQ60649 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
ClpbQ60649 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ClpbQ60649 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Gm7153-201ENSMUST00000117092 455 ntBASIC15.23■□□□□ 0.03
ClpbQ60649 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Rprl3-201ENSMUST00000157400 290 ntBASIC15.23■□□□□ 0.03
ClpbQ60649 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.23■□□□□ 0.03
ClpbQ60649 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.23■□□□□ 0.03
ClpbQ60649 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.23■□□□□ 0.03
ClpbQ60649 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ClpbQ60649 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ClpbQ60649 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClpbQ60649 Prob1-201ENSMUST00000097619 3021 ntBASIC15.22■□□□□ 0.03
ClpbQ60649 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.22■□□□□ 0.03
ClpbQ60649 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClpbQ60649 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms