Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shroom1Q5SX79 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Shroom1Q5SX79 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shroom1Q5SX79 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shroom1Q5SX79 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shroom1Q5SX79 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Gm8655-201ENSMUST00000221159 852 ntBASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shroom1Q5SX79 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Gm11780-201ENSMUST00000136880 516 ntBASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Gm6089-201ENSMUST00000197666 938 ntBASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Shroom1Q5SX79 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Mir6404-201ENSMUST00000183699 94 ntBASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Gm8000-201ENSMUST00000188378 592 ntBASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Gm5364-201ENSMUST00000216789 889 ntBASIC16.87■□□□□ 0.29
Shroom1Q5SX79 AV026068-213ENSMUST00000223675 1171 ntBASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Psmb5-202ENSMUST00000227257 622 ntBASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom1Q5SX79 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom1Q5SX79 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms