Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Trav6d-4Q5R1I0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6d-4Q5R1I0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6d-4Q5R1I0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Gm18733-201ENSMUST00000173950 856 ntBASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-4Q5R1I0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Gm25990-201ENSMUST00000102440 86 ntBASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Gm44771-201ENSMUST00000206975 626 ntBASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Gm18622-201ENSMUST00000219361 595 ntBASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-4Q5R1I0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Gm10060-201ENSMUST00000212002 111 ntBASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-4Q5R1I0 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Gm11780-201ENSMUST00000136880 516 ntBASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 Gm6257-201ENSMUST00000163864 910 ntBASIC13.3□□□□□ -0.28
Trav6d-4Q5R1I0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms