Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7d-4Q5R1H9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Gm4968-201ENSMUST00000071458 858 ntBASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7d-4Q5R1H9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Gm18958-201ENSMUST00000174258 762 ntBASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.15□□□□□ -0.46
Trav7d-4Q5R1H9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7d-4Q5R1H9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7d-4Q5R1H9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7d-4Q5R1H9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7d-4Q5R1H9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms