Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h1Q4VGL6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.33■□□□□ 0.53
Rc3h1Q4VGL6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.33■□□□□ 0.53
Rc3h1Q4VGL6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h1Q4VGL6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.33■□□□□ 0.53
Rc3h1Q4VGL6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h1Q4VGL6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h1Q4VGL6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h1Q4VGL6 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h1Q4VGL6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h1Q4VGL6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Gm11779-201ENSMUST00000118541 368 ntBASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Dancr-204ENSMUST00000132389 2347 ntBASIC18.31■□□□□ 0.52
Rc3h1Q4VGL6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rc3h1Q4VGL6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rc3h1Q4VGL6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms