Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
R3hdm4Q4VBF2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Gm12497-201ENSMUST00000138778 237 ntBASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
R3hdm4Q4VBF2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
R3hdm4Q4VBF2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Gm8097-201ENSMUST00000117903 829 ntBASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Gm27741-201ENSMUST00000185060 237 ntBASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
R3hdm4Q4VBF2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Gm18622-201ENSMUST00000219361 595 ntBASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Dancr-204ENSMUST00000132389 2347 ntBASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
R3hdm4Q4VBF2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
R3hdm4Q4VBF2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
R3hdm4Q4VBF2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
R3hdm4Q4VBF2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
R3hdm4Q4VBF2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
R3hdm4Q4VBF2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms