Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Trim80Q3V061 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim80Q3V061 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim80Q3V061 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim80Q3V061 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim80Q3V061 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim80Q3V061 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim80Q3V061 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim80Q3V061 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim80Q3V061 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim80Q3V061 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim80Q3V061 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim80Q3V061 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim80Q3V061 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim80Q3V061 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trim80Q3V061 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim80Q3V061 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim80Q3V061 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim80Q3V061 Gm4974-201ENSMUST00000209974 875 ntBASIC16.46■□□□□ 0.23
Trim80Q3V061 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim80Q3V061 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim80Q3V061 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim80Q3V061 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim80Q3V061 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.46■□□□□ 0.22
Trim80Q3V061 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Trim80Q3V061 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim80Q3V061 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim80Q3V061 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim80Q3V061 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trim80Q3V061 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim80Q3V061 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Gm12085-201ENSMUST00000119263 940 ntBASIC16.45■□□□□ 0.22
Trim80Q3V061 Gm25016-201ENSMUST00000158399 131 ntBASIC16.45■□□□□ 0.22
Trim80Q3V061 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trim80Q3V061 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Trim80Q3V061 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Trim80Q3V061 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim80Q3V061 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim80Q3V061 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim80Q3V061 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trim80Q3V061 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim80Q3V061 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.44■□□□□ 0.22
Trim80Q3V061 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Trim80Q3V061 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim80Q3V061 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trim80Q3V061 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Trim80Q3V061 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trim80Q3V061 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 Gm14859-201ENSMUST00000117752 357 ntBASIC16.44■□□□□ 0.22
Trim80Q3V061 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim80Q3V061 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.44■□□□□ 0.22
Trim80Q3V061 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim80Q3V061 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Trim80Q3V061 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim80Q3V061 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim80Q3V061 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim80Q3V061 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim80Q3V061 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms