Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Brf2Q3UAW9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Brf2Q3UAW9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Brf2Q3UAW9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Brf2Q3UAW9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms