Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col5a2Q3U962 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col5a2Q3U962 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col5a2Q3U962 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col5a2Q3U962 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col5a2Q3U962 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.75■□□□□ 0.59
Col5a2Q3U962 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col5a2Q3U962 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.75■□□□□ 0.59
Col5a2Q3U962 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col5a2Q3U962 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col5a2Q3U962 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col5a2Q3U962 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Col5a2Q3U962 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.74■□□□□ 0.59
Col5a2Q3U962 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col5a2Q3U962 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.73■□□□□ 0.59
Col5a2Q3U962 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Gm12151-201ENSMUST00000121374 290 ntBASIC18.73■□□□□ 0.59
Col5a2Q3U962 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.73■□□□□ 0.59
Col5a2Q3U962 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Col5a2Q3U962 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.72■□□□□ 0.59
Col5a2Q3U962 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Gm27618-201ENSMUST00000183671 60 ntBASIC18.72■□□□□ 0.59
Col5a2Q3U962 Gm27430-201ENSMUST00000184585 107 ntBASIC18.72■□□□□ 0.59
Col5a2Q3U962 Gm44333-201ENSMUST00000197168 107 ntBASIC18.72■□□□□ 0.59
Col5a2Q3U962 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.72■□□□□ 0.59
Col5a2Q3U962 Gm2423-201ENSMUST00000074863 733 ntBASIC18.72■□□□□ 0.59
Col5a2Q3U962 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col5a2Q3U962 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.72■□□□□ 0.59
Col5a2Q3U962 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Gm24158-201ENSMUST00000175263 71 ntBASIC18.71■□□□□ 0.59
Col5a2Q3U962 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.71■□□□□ 0.59
Col5a2Q3U962 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.71■□□□□ 0.59
Col5a2Q3U962 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.71■□□□□ 0.59
Col5a2Q3U962 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.71■□□□□ 0.59
Col5a2Q3U962 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col5a2Q3U962 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms