Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm37917-201ENSMUST00000194711 392 ntBASIC18.57■□□□□ 0.56
Rnf180Q3U827 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.57■□□□□ 0.56
Rnf180Q3U827 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rnf180Q3U827 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rnf180Q3U827 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf180Q3U827 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf180Q3U827 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf180Q3U827 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf180Q3U827 Grk6-206ENSMUST00000224995 2971 ntBASIC18.57■□□□□ 0.56
Rnf180Q3U827 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.56■□□□□ 0.56
Rnf180Q3U827 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Gm18766-201ENSMUST00000189811 808 ntBASIC18.56■□□□□ 0.56
Rnf180Q3U827 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC18.56■□□□□ 0.56
Rnf180Q3U827 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf180Q3U827 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf180Q3U827 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf180Q3U827 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf180Q3U827 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.55■□□□□ 0.56
Rnf180Q3U827 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf180Q3U827 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf180Q3U827 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Rnf180Q3U827 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.55■□□□□ 0.56
Rnf180Q3U827 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rnf180Q3U827 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.55■□□□□ 0.56
Rnf180Q3U827 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf180Q3U827 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnf180Q3U827 Gm27892-201ENSMUST00000185017 106 ntBASIC18.55■□□□□ 0.56
Rnf180Q3U827 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf180Q3U827 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnf180Q3U827 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf180Q3U827 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.55■□□□□ 0.56
Rnf180Q3U827 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf180Q3U827 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf180Q3U827 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Rnf180Q3U827 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Gm42612-201ENSMUST00000197986 623 ntBASIC18.53■□□□□ 0.56
Rnf180Q3U827 Gm43170-201ENSMUST00000199827 612 ntBASIC18.53■□□□□ 0.56
Rnf180Q3U827 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Gm20445-201ENSMUST00000061905 565 ntBASIC18.53■□□□□ 0.56
Rnf180Q3U827 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf180Q3U827 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf180Q3U827 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms