Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.9■□□□□ 0.3
Trim43aQ3TL54 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43aQ3TL54 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trim43aQ3TL54 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim43aQ3TL54 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim43aQ3TL54 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim43aQ3TL54 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim43aQ3TL54 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Gm11336-201ENSMUST00000118168 334 ntBASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43aQ3TL54 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43aQ3TL54 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Gm10231-201ENSMUST00000181584 441 ntBASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Gm10175-202ENSMUST00000208752 441 ntBASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms