Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim63Q38HM4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.18□□□□□ -0.3
Trim63Q38HM4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Gm7417-201ENSMUST00000192950 473 ntBASIC13.18□□□□□ -0.3
Trim63Q38HM4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.18□□□□□ -0.3
Trim63Q38HM4 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.18□□□□□ -0.3
Trim63Q38HM4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trim63Q38HM4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim63Q38HM4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim63Q38HM4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.16□□□□□ -0.3
Trim63Q38HM4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim63Q38HM4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms