Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.17□□□□□ -0.14
Chd8Q09XV5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.17□□□□□ -0.14
Chd8Q09XV5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.16□□□□□ -0.14
Chd8Q09XV5 Gm27533-201ENSMUST00000183800 152 ntBASIC14.16□□□□□ -0.14
Chd8Q09XV5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd8Q09XV5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.15□□□□□ -0.14
Chd8Q09XV5 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.15□□□□□ -0.14
Chd8Q09XV5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 AU022133-201ENSMUST00000200601 873 ntBASIC14.15□□□□□ -0.14
Chd8Q09XV5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd8Q09XV5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Mir7070-201ENSMUST00000183657 86 ntBASIC14.14□□□□□ -0.15
Chd8Q09XV5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Gm20445-201ENSMUST00000061905 565 ntBASIC14.14□□□□□ -0.15
Chd8Q09XV5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.14□□□□□ -0.15
Chd8Q09XV5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.14□□□□□ -0.15
Chd8Q09XV5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.14□□□□□ -0.15
Chd8Q09XV5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd8Q09XV5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms