Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tff1Q08423 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tff1Q08423 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tff1Q08423 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tff1Q08423 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tff1Q08423 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tff1Q08423 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tff1Q08423 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.24□□□□□ -0.29
Tff1Q08423 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.24□□□□□ -0.29
Tff1Q08423 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tff1Q08423 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.24□□□□□ -0.29
Tff1Q08423 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Gm27389-201ENSMUST00000183622 195 ntBASIC13.24□□□□□ -0.29
Tff1Q08423 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.24□□□□□ -0.29
Tff1Q08423 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.24□□□□□ -0.29
Tff1Q08423 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Tff1Q08423 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tff1Q08423 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tff1Q08423 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.23□□□□□ -0.29
Tff1Q08423 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.23□□□□□ -0.29
Tff1Q08423 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.23□□□□□ -0.29
Tff1Q08423 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.23□□□□□ -0.29
Tff1Q08423 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.23□□□□□ -0.29
Tff1Q08423 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.23□□□□□ -0.29
Tff1Q08423 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.23□□□□□ -0.29
Tff1Q08423 Gm17807-201ENSMUST00000186869 298 ntBASIC13.23□□□□□ -0.29
Tff1Q08423 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.23□□□□□ -0.29
Tff1Q08423 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Tff1Q08423 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 App-207ENSMUST00000227737 2827 ntBASIC13.23□□□□□ -0.29
Tff1Q08423 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tff1Q08423 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tff1Q08423 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Tff1Q08423 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Tff1Q08423 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Tff1Q08423 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tff1Q08423 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.22□□□□□ -0.29
Tff1Q08423 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tff1Q08423 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tff1Q08423 Gm13474-201ENSMUST00000122466 815 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms