Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Hspg2Q05793 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.63□□□□□ -0.55
Hspg2Q05793 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Hspg2Q05793 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Hspg2Q05793 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Hspg2Q05793 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.63□□□□□ -0.55
Hspg2Q05793 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.63□□□□□ -0.55
Hspg2Q05793 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Hspg2Q05793 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC11.63□□□□□ -0.55
Hspg2Q05793 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hspg2Q05793 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.62□□□□□ -0.55
Hspg2Q05793 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.62□□□□□ -0.55
Hspg2Q05793 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hspg2Q05793 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hspg2Q05793 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.62□□□□□ -0.55
Hspg2Q05793 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.62□□□□□ -0.55
Hspg2Q05793 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Hspg2Q05793 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Hspg2Q05793 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.62□□□□□ -0.55
Hspg2Q05793 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hspg2Q05793 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.62□□□□□ -0.55
Hspg2Q05793 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hspg2Q05793 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Hspg2Q05793 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.61□□□□□ -0.55
Hspg2Q05793 Gm10253-201ENSMUST00000194270 940 ntBASIC11.61□□□□□ -0.55
Hspg2Q05793 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hspg2Q05793 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hspg2Q05793 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hspg2Q05793 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.61□□□□□ -0.55
Hspg2Q05793 Gm9682-201ENSMUST00000197505 556 ntBASIC11.61□□□□□ -0.55
Hspg2Q05793 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hspg2Q05793 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hspg2Q05793 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Hspg2Q05793 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hspg2Q05793 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.61□□□□□ -0.55
Hspg2Q05793 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hspg2Q05793 Gm15635-204ENSMUST00000208024 2539 ntBASIC11.6□□□□□ -0.55
Hspg2Q05793 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hspg2Q05793 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.6□□□□□ -0.55
Hspg2Q05793 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.6□□□□□ -0.55
Hspg2Q05793 Thap2-203ENSMUST00000218989 527 ntBASIC11.6□□□□□ -0.55
Hspg2Q05793 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hspg2Q05793 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.6□□□□□ -0.55
Hspg2Q05793 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.6□□□□□ -0.55
Hspg2Q05793 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.6□□□□□ -0.55
Hspg2Q05793 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hspg2Q05793 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hspg2Q05793 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.6□□□□□ -0.55
Hspg2Q05793 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hspg2Q05793 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hspg2Q05793 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hspg2Q05793 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hspg2Q05793 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms