Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1sQ02789 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1sQ02789 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1sQ02789 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1sQ02789 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.96■□□□□ 0.79
Cacna1sQ02789 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cacna1sQ02789 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.96■□□□□ 0.79
Cacna1sQ02789 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Cacna1sQ02789 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC19.96■□□□□ 0.79
Cacna1sQ02789 Gm10499-201ENSMUST00000174094 934 ntBASIC19.96■□□□□ 0.79
Cacna1sQ02789 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.96■□□□□ 0.79
Cacna1sQ02789 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.96■□□□□ 0.79
Cacna1sQ02789 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1sQ02789 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1sQ02789 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.95■□□□□ 0.78
Cacna1sQ02789 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 Gm9063-201ENSMUST00000223299 582 ntBASIC19.95■□□□□ 0.78
Cacna1sQ02789 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cacna1sQ02789 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.95■□□□□ 0.78
Cacna1sQ02789 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.95■□□□□ 0.78
Cacna1sQ02789 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Cacna1sQ02789 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cacna1sQ02789 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1sQ02789 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.94■□□□□ 0.78
Cacna1sQ02789 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.94■□□□□ 0.78
Cacna1sQ02789 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC19.93■□□□□ 0.78
Cacna1sQ02789 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1sQ02789 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.92■□□□□ 0.78
Cacna1sQ02789 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 AC125350.2-201ENSMUST00000224737 727 ntBASIC19.92■□□□□ 0.78
Cacna1sQ02789 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.92■□□□□ 0.78
Cacna1sQ02789 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Gm11543-201ENSMUST00000120758 370 ntBASIC19.91■□□□□ 0.78
Cacna1sQ02789 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.91■□□□□ 0.78
Cacna1sQ02789 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.91■□□□□ 0.78
Cacna1sQ02789 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.91■□□□□ 0.78
Cacna1sQ02789 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms