Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx3-2P97503 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.99□□□□□ -0.01
Nkx3-2P97503 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.99□□□□□ -0.01
Nkx3-2P97503 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx3-2P97503 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.98□□□□□ -0.01
Nkx3-2P97503 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Gm6296-201ENSMUST00000222599 943 ntBASIC14.98□□□□□ -0.01
Nkx3-2P97503 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nkx3-2P97503 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx3-2P97503 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Gm7862-201ENSMUST00000121461 292 ntBASIC14.97□□□□□ -0.01
Nkx3-2P97503 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.97□□□□□ -0.01
Nkx3-2P97503 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.97□□□□□ -0.01
Nkx3-2P97503 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx3-2P97503 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx3-2P97503 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx3-2P97503 Gm18733-201ENSMUST00000173950 856 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms