Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H3f3aP84244 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3f3aP84244 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3f3aP84244 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.15□□□□□ -0.14
H3f3aP84244 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3f3aP84244 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3f3aP84244 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3f3aP84244 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3f3aP84244 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H3f3aP84244 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
H3f3aP84244 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
H3f3aP84244 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
H3f3aP84244 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
H3f3aP84244 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.14□□□□□ -0.15
H3f3aP84244 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.14□□□□□ -0.15
H3f3aP84244 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.14□□□□□ -0.15
H3f3aP84244 Gm27867-201ENSMUST00000184778 125 ntBASIC14.14□□□□□ -0.15
H3f3aP84244 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.14□□□□□ -0.15
H3f3aP84244 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.14□□□□□ -0.15
H3f3aP84244 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
H3f3aP84244 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H3f3aP84244 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
H3f3aP84244 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
H3f3aP84244 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
H3f3aP84244 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.13□□□□□ -0.15
H3f3aP84244 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
H3f3aP84244 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.13□□□□□ -0.15
H3f3aP84244 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.13□□□□□ -0.15
H3f3aP84244 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
H3f3aP84244 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.13□□□□□ -0.15
H3f3aP84244 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.13□□□□□ -0.15
H3f3aP84244 Gm9172-201ENSMUST00000212092 954 ntBASIC14.13□□□□□ -0.15
H3f3aP84244 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.13□□□□□ -0.15
H3f3aP84244 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
H3f3aP84244 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.13□□□□□ -0.15
H3f3aP84244 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
H3f3aP84244 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
H3f3aP84244 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
H3f3aP84244 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H3f3aP84244 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
H3f3aP84244 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.12□□□□□ -0.15
H3f3aP84244 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.12□□□□□ -0.15
H3f3aP84244 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
H3f3aP84244 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms