Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Hist1h3bP84228 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14□□□□□ -0.17
Hist1h3bP84228 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hist1h3bP84228 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Hist1h3bP84228 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.99□□□□□ -0.17
Hist1h3bP84228 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Gm15794-201ENSMUST00000120182 631 ntBASIC13.99□□□□□ -0.17
Hist1h3bP84228 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Mir6404-201ENSMUST00000183699 94 ntBASIC13.99□□□□□ -0.17
Hist1h3bP84228 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.99□□□□□ -0.17
Hist1h3bP84228 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.99□□□□□ -0.17
Hist1h3bP84228 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h3bP84228 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.98□□□□□ -0.17
Hist1h3bP84228 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h3bP84228 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.97□□□□□ -0.17
Hist1h3bP84228 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hist1h3bP84228 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms