Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SgcbP82349 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
SgcbP82349 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SgcbP82349 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcbP82349 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SgcbP82349 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SgcbP82349 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SgcbP82349 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SgcbP82349 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SgcbP82349 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
SgcbP82349 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Gm27459-201ENSMUST00000184860 107 ntBASIC14.15□□□□□ -0.14
SgcbP82349 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.15□□□□□ -0.14
SgcbP82349 Gm34391-201ENSMUST00000203706 907 ntBASIC14.15□□□□□ -0.14
SgcbP82349 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SgcbP82349 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcbP82349 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SgcbP82349 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.15□□□□□ -0.14
SgcbP82349 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.14□□□□□ -0.15
SgcbP82349 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SgcbP82349 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SgcbP82349 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
SgcbP82349 Mir6404-201ENSMUST00000183699 94 ntBASIC14.14□□□□□ -0.15
SgcbP82349 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SgcbP82349 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.14□□□□□ -0.15
SgcbP82349 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SgcbP82349 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.14□□□□□ -0.15
SgcbP82349 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SgcbP82349 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SgcbP82349 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SgcbP82349 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SgcbP82349 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.13□□□□□ -0.15
SgcbP82349 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SgcbP82349 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SgcbP82349 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.13□□□□□ -0.15
SgcbP82349 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Gm9172-201ENSMUST00000212092 954 ntBASIC14.13□□□□□ -0.15
SgcbP82349 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.13□□□□□ -0.15
SgcbP82349 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SgcbP82349 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.13□□□□□ -0.15
SgcbP82349 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SgcbP82349 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SgcbP82349 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SgcbP82349 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SgcbP82349 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms