Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Traf6P70196 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.67■□□□□ 0.1
Traf6P70196 Asic1-205ENSMUST00000228185 1818 ntBASIC15.67■□□□□ 0.1
Traf6P70196 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Traf6P70196 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Traf6P70196 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.67■□□□□ 0.1
Traf6P70196 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Traf6P70196 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Traf6P70196 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Traf6P70196 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Traf6P70196 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Traf6P70196 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Traf6P70196 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.66■□□□□ 0.1
Traf6P70196 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.66■□□□□ 0.1
Traf6P70196 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.66■□□□□ 0.1
Traf6P70196 Gm22697-201ENSMUST00000175194 63 ntBASIC15.66■□□□□ 0.1
Traf6P70196 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Traf6P70196 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Traf6P70196 Gm18032-201ENSMUST00000222541 538 ntBASIC15.66■□□□□ 0.1
Traf6P70196 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Traf6P70196 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Traf6P70196 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Traf6P70196 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Traf6P70196 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Traf6P70196 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Traf6P70196 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Traf6P70196 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.66■□□□□ 0.1
Traf6P70196 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Traf6P70196 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Traf6P70196 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Traf6P70196 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Traf6P70196 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.65■□□□□ 0.1
Traf6P70196 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.65■□□□□ 0.1
Traf6P70196 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.65■□□□□ 0.1
Traf6P70196 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Traf6P70196 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Traf6P70196 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Traf6P70196 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Traf6P70196 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.64■□□□□ 0.09
Traf6P70196 Gm27389-201ENSMUST00000183622 195 ntBASIC15.64■□□□□ 0.09
Traf6P70196 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Traf6P70196 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Traf6P70196 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Traf6P70196 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Traf6P70196 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Traf6P70196 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.63■□□□□ 0.09
Traf6P70196 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.63■□□□□ 0.09
Traf6P70196 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Traf6P70196 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Traf6P70196 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Traf6P70196 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Traf6P70196 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.63■□□□□ 0.09
Traf6P70196 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Traf6P70196 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Traf6P70196 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms