Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ThraP63058 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ThraP63058 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.1■□□□□ 0.17
ThraP63058 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ThraP63058 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ThraP63058 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
ThraP63058 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.09■□□□□ 0.17
ThraP63058 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ThraP63058 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.09■□□□□ 0.17
ThraP63058 Gm44771-201ENSMUST00000206975 626 ntBASIC16.09■□□□□ 0.17
ThraP63058 Mzt1-203ENSMUST00000227948 952 ntBASIC16.09■□□□□ 0.17
ThraP63058 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ThraP63058 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ThraP63058 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ThraP63058 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ThraP63058 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ThraP63058 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ThraP63058 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ThraP63058 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
ThraP63058 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
ThraP63058 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ThraP63058 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ThraP63058 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.08■□□□□ 0.16
ThraP63058 Gm44450-201ENSMUST00000199528 114 ntBASIC16.08■□□□□ 0.16
ThraP63058 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.08■□□□□ 0.16
ThraP63058 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
ThraP63058 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.08■□□□□ 0.16
ThraP63058 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ThraP63058 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ThraP63058 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.07■□□□□ 0.16
ThraP63058 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ThraP63058 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ThraP63058 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ThraP63058 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.07■□□□□ 0.16
ThraP63058 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.07■□□□□ 0.16
ThraP63058 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ThraP63058 Gm27459-201ENSMUST00000184860 107 ntBASIC16.07■□□□□ 0.16
ThraP63058 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ThraP63058 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ThraP63058 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ThraP63058 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ThraP63058 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ThraP63058 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
ThraP63058 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.07■□□□□ 0.16
ThraP63058 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.07■□□□□ 0.16
ThraP63058 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.07■□□□□ 0.16
ThraP63058 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ThraP63058 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ThraP63058 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ThraP63058 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ThraP63058 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
ThraP63058 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.06■□□□□ 0.16
ThraP63058 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.06■□□□□ 0.16
ThraP63058 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.06■□□□□ 0.16
ThraP63058 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.06■□□□□ 0.16
ThraP63058 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.06■□□□□ 0.16
ThraP63058 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Gm29707-201ENSMUST00000196325 491 ntBASIC16.06■□□□□ 0.16
ThraP63058 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.06■□□□□ 0.16
ThraP63058 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ThraP63058 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ThraP63058 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms