Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh11P55288 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Cdh11P55288 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cdh11P55288 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh11P55288 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh11P55288 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cdh11P55288 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh11P55288 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdh11P55288 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.51□□□□□ -0.09
Cdh11P55288 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdh11P55288 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.51□□□□□ -0.09
Cdh11P55288 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdh11P55288 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.51□□□□□ -0.09
Cdh11P55288 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.51□□□□□ -0.09
Cdh11P55288 Gm10566-201ENSMUST00000086739 996 ntBASIC14.51□□□□□ -0.09
Cdh11P55288 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.51□□□□□ -0.09
Cdh11P55288 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Cdh11P55288 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh11P55288 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.5□□□□□ -0.09
Cdh11P55288 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cdh11P55288 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.5□□□□□ -0.09
Cdh11P55288 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Cdh11P55288 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdh11P55288 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Cdh11P55288 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cdh11P55288 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Asic1-205ENSMUST00000228185 1818 ntBASIC14.5□□□□□ -0.09
Cdh11P55288 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh11P55288 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Cdh11P55288 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdh11P55288 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Gm17808-201ENSMUST00000200859 894 ntBASIC14.49□□□□□ -0.09
Cdh11P55288 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cdh11P55288 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdh11P55288 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdh11P55288 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms