Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.21■□□□□ 0.03
Sox3P53784 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox3P53784 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox3P53784 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox3P53784 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sox3P53784 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox3P53784 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.21■□□□□ 0.03
Sox3P53784 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox3P53784 Gm13312-201ENSMUST00000119631 718 ntBASIC15.21■□□□□ 0.03
Sox3P53784 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox3P53784 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox3P53784 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.21■□□□□ 0.03
Sox3P53784 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.21■□□□□ 0.03
Sox3P53784 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox3P53784 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox3P53784 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sox3P53784 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox3P53784 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.21■□□□□ 0.02
Sox3P53784 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox3P53784 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.21■□□□□ 0.02
Sox3P53784 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox3P53784 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Sox3P53784 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox3P53784 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sox3P53784 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sox3P53784 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sox3P53784 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sox3P53784 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sox3P53784 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Gm14494-201ENSMUST00000118786 435 ntBASIC15.2■□□□□ 0.02
Sox3P53784 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.2■□□□□ 0.02
Sox3P53784 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.2■□□□□ 0.02
Sox3P53784 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.2■□□□□ 0.02
Sox3P53784 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.2■□□□□ 0.02
Sox3P53784 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.2■□□□□ 0.02
Sox3P53784 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sox3P53784 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox3P53784 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sox3P53784 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox3P53784 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox3P53784 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
Sox3P53784 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox3P53784 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.19■□□□□ 0.02
Sox3P53784 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Sox3P53784 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox3P53784 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sox3P53784 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox3P53784 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox3P53784 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox3P53784 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Sox3P53784 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox3P53784 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.18■□□□□ 0.02
Sox3P53784 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Sox3P53784 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Sox3P53784 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Sox3P53784 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Sox3P53784 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox3P53784 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sox3P53784 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms