Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 AY702102-202ENSMUST00000194651 1173 ntBASIC15.33■□□□□ 0.04
Lbx1P52955 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.33■□□□□ 0.04
Lbx1P52955 Gm6888-201ENSMUST00000221983 706 ntBASIC15.33■□□□□ 0.04
Lbx1P52955 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.33■□□□□ 0.04
Lbx1P52955 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.33■□□□□ 0.04
Lbx1P52955 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lbx1P52955 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.32■□□□□ 0.04
Lbx1P52955 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.32■□□□□ 0.04
Lbx1P52955 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lbx1P52955 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.32■□□□□ 0.04
Lbx1P52955 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.32■□□□□ 0.04
Lbx1P52955 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Lbx1P52955 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.32■□□□□ 0.04
Lbx1P52955 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.32■□□□□ 0.04
Lbx1P52955 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.32■□□□□ 0.04
Lbx1P52955 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lbx1P52955 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lbx1P52955 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lbx1P52955 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.31■□□□□ 0.04
Lbx1P52955 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lbx1P52955 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lbx1P52955 Gm6415-201ENSMUST00000118488 348 ntBASIC15.31■□□□□ 0.04
Lbx1P52955 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.31■□□□□ 0.04
Lbx1P52955 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.31■□□□□ 0.04
Lbx1P52955 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Lbx1P52955 Gm8515-201ENSMUST00000194852 576 ntBASIC15.31■□□□□ 0.04
Lbx1P52955 Gm18057-201ENSMUST00000208220 503 ntBASIC15.31■□□□□ 0.04
Lbx1P52955 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lbx1P52955 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lbx1P52955 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lbx1P52955 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lbx1P52955 Syt7-204ENSMUST00000223586 1344 ntBASIC15.31■□□□□ 0.04
Lbx1P52955 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lbx1P52955 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lbx1P52955 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.31■□□□□ 0.04
Lbx1P52955 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lbx1P52955 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Lbx1P52955 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lbx1P52955 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lbx1P52955 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lbx1P52955 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lbx1P52955 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lbx1P52955 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Lbx1P52955 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lbx1P52955 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lbx1P52955 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Gm25287-201ENSMUST00000103846 110 ntBASIC15.3■□□□□ 0.04
Lbx1P52955 Gm22918-201ENSMUST00000103855 110 ntBASIC15.3■□□□□ 0.04
Lbx1P52955 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.3■□□□□ 0.04
Lbx1P52955 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.3■□□□□ 0.04
Lbx1P52955 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.3■□□□□ 0.04
Lbx1P52955 Gm14719-201ENSMUST00000121891 340 ntBASIC15.3■□□□□ 0.04
Lbx1P52955 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.3■□□□□ 0.04
Lbx1P52955 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lbx1P52955 Rpph1-201ENSMUST00000175096 319 ntBASIC15.3■□□□□ 0.04
Lbx1P52955 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Lbx1P52955 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Gm45331-201ENSMUST00000209868 554 ntBASIC15.3■□□□□ 0.04
Lbx1P52955 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Gm6180-201ENSMUST00000065243 498 ntBASIC15.3■□□□□ 0.04
Lbx1P52955 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Lbx1P52955 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lbx1P52955 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lbx1P52955 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms