Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-1P50220 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-1P50220 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-1P50220 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.21□□□□□ -0.3
Nkx2-1P50220 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.2□□□□□ -0.3
Nkx2-1P50220 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Nkx2-1P50220 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-1P50220 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-1P50220 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.19□□□□□ -0.3
Nkx2-1P50220 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Gm12085-201ENSMUST00000119263 940 ntBASIC13.19□□□□□ -0.3
Nkx2-1P50220 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Gm22240-201ENSMUST00000175225 82 ntBASIC13.19□□□□□ -0.3
Nkx2-1P50220 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx2-1P50220 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.19□□□□□ -0.3
Nkx2-1P50220 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-1P50220 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-1P50220 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nkx2-1P50220 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx2-1P50220 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx2-1P50220 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.18□□□□□ -0.3
Nkx2-1P50220 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-1P50220 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms