Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.84■□□□□ 0.29
HttP42859 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HttP42859 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Gm17150-201ENSMUST00000165577 381 ntBASIC16.84■□□□□ 0.29
HttP42859 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HttP42859 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HttP42859 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HttP42859 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
HttP42859 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.83■□□□□ 0.29
HttP42859 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HttP42859 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HttP42859 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HttP42859 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HttP42859 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HttP42859 Gm6973-201ENSMUST00000117080 721 ntBASIC16.83■□□□□ 0.28
HttP42859 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HttP42859 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HttP42859 Gm18766-201ENSMUST00000189811 808 ntBASIC16.83■□□□□ 0.28
HttP42859 Gm45384-201ENSMUST00000210451 277 ntBASIC16.83■□□□□ 0.28
HttP42859 Gm45668-201ENSMUST00000211271 493 ntBASIC16.83■□□□□ 0.28
HttP42859 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HttP42859 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HttP42859 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HttP42859 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HttP42859 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HttP42859 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HttP42859 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HttP42859 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.83■□□□□ 0.28
HttP42859 Gm27838-201ENSMUST00000184829 128 ntBASIC16.83■□□□□ 0.28
HttP42859 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.83■□□□□ 0.28
HttP42859 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.82■□□□□ 0.28
HttP42859 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.82■□□□□ 0.28
HttP42859 Gm10154-201ENSMUST00000084445 354 ntBASIC16.82■□□□□ 0.28
HttP42859 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.82■□□□□ 0.28
HttP42859 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HttP42859 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HttP42859 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.81■□□□□ 0.28
HttP42859 Gm11425-201ENSMUST00000119608 498 ntBASIC16.81■□□□□ 0.28
HttP42859 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Gm23984-201ENSMUST00000157139 203 ntBASIC16.81■□□□□ 0.28
HttP42859 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HttP42859 Gm9396-201ENSMUST00000076703 567 ntBASIC16.81■□□□□ 0.28
HttP42859 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.81■□□□□ 0.28
HttP42859 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HttP42859 Gm22189-201ENSMUST00000103822 86 ntBASIC16.81■□□□□ 0.28
HttP42859 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HttP42859 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HttP42859 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.81■□□□□ 0.28
HttP42859 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.81■□□□□ 0.28
HttP42859 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.81■□□□□ 0.28
HttP42859 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HttP42859 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HttP42859 Gm6266-201ENSMUST00000203844 806 ntBASIC16.81■□□□□ 0.28
HttP42859 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HttP42859 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.8■□□□□ 0.28
HttP42859 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HttP42859 Gm9824-201ENSMUST00000178707 561 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms