Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cxcl12P40224 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cxcl12P40224 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Cxcl12P40224 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Cxcl12P40224 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cxcl12P40224 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cxcl12P40224 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cxcl12P40224 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cxcl12P40224 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.33■□□□□ 0.2
Cxcl12P40224 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cxcl12P40224 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.33■□□□□ 0.2
Cxcl12P40224 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.33■□□□□ 0.2
Cxcl12P40224 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cxcl12P40224 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm22065-201ENSMUST00000103753 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm22066-201ENSMUST00000103761 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm24932-201ENSMUST00000103763 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm24115-201ENSMUST00000103799 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm22190-201ENSMUST00000103827 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm22191-201ENSMUST00000103831 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm24721-201ENSMUST00000103849 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm28018-201ENSMUST00000103869 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm26399-201ENSMUST00000103937 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.32■□□□□ 0.2
Cxcl12P40224 Rpph1-201ENSMUST00000175096 319 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm25349-201ENSMUST00000177728 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm23616-201ENSMUST00000177797 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm25871-201ENSMUST00000177816 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm24752-201ENSMUST00000178240 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm24496-201ENSMUST00000178287 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm25649-201ENSMUST00000178476 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm25548-201ENSMUST00000178681 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm23147-201ENSMUST00000178841 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm26095-201ENSMUST00000179270 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm22171-201ENSMUST00000179283 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm23936-201ENSMUST00000179354 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm22619-201ENSMUST00000179516 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm25255-201ENSMUST00000179579 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm24755-201ENSMUST00000179691 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm26506-201ENSMUST00000179692 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm25086-201ENSMUST00000179931 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm23243-201ENSMUST00000180047 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm24659-201ENSMUST00000180212 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm24169-201ENSMUST00000180244 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm23689-201ENSMUST00000180354 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm27359-201ENSMUST00000184153 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm27785-201ENSMUST00000184268 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm27466-201ENSMUST00000184396 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm27703-201ENSMUST00000184836 110 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm43767-201ENSMUST00000198933 381 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl12P40224 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl12P40224 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.32■□□□□ 0.2
Cxcl12P40224 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cxcl12P40224 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl12P40224 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl12P40224 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cxcl12P40224 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl12P40224 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl12P40224 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cxcl12P40224 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cxcl12P40224 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Cxcl12P40224 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl12P40224 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl12P40224 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl12P40224 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl12P40224 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cxcl12P40224 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.31■□□□□ 0.2
Cxcl12P40224 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms