Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LdlrP35951 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.84■□□□□ 0.13
LdlrP35951 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LdlrP35951 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
LdlrP35951 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LdlrP35951 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LdlrP35951 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LdlrP35951 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LdlrP35951 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.83■□□□□ 0.13
LdlrP35951 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.83■□□□□ 0.13
LdlrP35951 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LdlrP35951 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LdlrP35951 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Gm7153-201ENSMUST00000117092 455 ntBASIC15.83■□□□□ 0.12
LdlrP35951 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.83■□□□□ 0.12
LdlrP35951 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.83■□□□□ 0.12
LdlrP35951 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LdlrP35951 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.83■□□□□ 0.12
LdlrP35951 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.83■□□□□ 0.12
LdlrP35951 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LdlrP35951 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LdlrP35951 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.82■□□□□ 0.12
LdlrP35951 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.82■□□□□ 0.12
LdlrP35951 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.82■□□□□ 0.12
LdlrP35951 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.82■□□□□ 0.12
LdlrP35951 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.82■□□□□ 0.12
LdlrP35951 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LdlrP35951 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LdlrP35951 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.81■□□□□ 0.12
LdlrP35951 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
LdlrP35951 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LdlrP35951 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.81■□□□□ 0.12
LdlrP35951 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.81■□□□□ 0.12
LdlrP35951 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.81■□□□□ 0.12
LdlrP35951 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.81■□□□□ 0.12
LdlrP35951 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.81■□□□□ 0.12
LdlrP35951 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.81■□□□□ 0.12
LdlrP35951 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
LdlrP35951 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LdlrP35951 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LdlrP35951 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LdlrP35951 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LdlrP35951 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms