Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sox5P35710 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Sox5P35710 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox5P35710 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Sox5P35710 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sox5P35710 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sox5P35710 BC037039-201ENSMUST00000192003 2205 ntBASIC17.38■□□□□ 0.37
Sox5P35710 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Sox5P35710 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.38■□□□□ 0.37
Sox5P35710 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sox5P35710 Gm18959-201ENSMUST00000208954 655 ntBASIC17.38■□□□□ 0.37
Sox5P35710 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.38■□□□□ 0.37
Sox5P35710 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox5P35710 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox5P35710 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox5P35710 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox5P35710 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox5P35710 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Sox5P35710 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox5P35710 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox5P35710 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox5P35710 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.37■□□□□ 0.37
Sox5P35710 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.37■□□□□ 0.37
Sox5P35710 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.37■□□□□ 0.37
Sox5P35710 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.37■□□□□ 0.37
Sox5P35710 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.37■□□□□ 0.37
Sox5P35710 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox5P35710 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox5P35710 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox5P35710 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox5P35710 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox5P35710 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox5P35710 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Sox5P35710 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Sox5P35710 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.36■□□□□ 0.37
Sox5P35710 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.36■□□□□ 0.37
Sox5P35710 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Gm44430-201ENSMUST00000203376 995 ntBASIC17.36■□□□□ 0.37
Sox5P35710 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Sox5P35710 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.36■□□□□ 0.37
Sox5P35710 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Sox5P35710 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox5P35710 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.35■□□□□ 0.37
Sox5P35710 Gm43799-201ENSMUST00000201845 579 ntBASIC17.35■□□□□ 0.37
Sox5P35710 Gm21559-201ENSMUST00000220638 855 ntBASIC17.35■□□□□ 0.37
Sox5P35710 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Gm8587-201ENSMUST00000076538 843 ntBASIC17.35■□□□□ 0.37
Sox5P35710 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Sox5P35710 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox5P35710 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.35■□□□□ 0.37
Sox5P35710 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sox5P35710 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Sox5P35710 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.34■□□□□ 0.37
Sox5P35710 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Gm10052-201ENSMUST00000168019 960 ntBASIC17.34■□□□□ 0.37
Sox5P35710 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.34■□□□□ 0.37
Sox5P35710 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms